Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948643.1_cds_XP_016489833.1_80314
CDS Infomation

[gene=LOC107809689] [db_xref=GeneID:107809689] [protein=probable serine/threonine-protein kinase abkC] [protein_id=XP_016489833.1] [location=join(3668..3675,4491..5814,7088..7357,8254..8409,8617..8736)] [gbkey=CDS]
Sequence

ATGTCAAGATTCTTAGCGGTTGGTAAAACTAAAGGACTTGGACAATCCTTATGCAGAAAT
CAGACCACTATCCGTCCAGAACAAGCGAGAAAAGGAAATCTTATTAGGATTGGGGTAAGT
TCTCCTAGATGTAGATTTTATGGGCAATATGTGTCTATCACAAGGGGACACGCTTCATCC
ATGACATATAGAATGCATAGTACTTTTCGTGGGAGATGTTTAATGACTTCACCAAGAACA
TCTGTAAGTCATCACGCACAAATAGCTTGGAAGAAGTTATCATGTAAATCTTTCTACAAA
GGACAAACTTTTATCTGCTTAAGTCGATTTGCACAAGCGCTTTGCTTGGCGTTGAGCAGG
TCTCATGTGGTTCTCCCTGGTTTTCTTGGCTTAACATATGGAAGAAATATAGCGTTGGCA
CGAGCACCGTCAGACTTGGAGAGTGGTCGCCCGAGGAATAGCTTATACAGGCATGCTGAA
GATGGACATGTTTTGATTACCTCATTATTGCATTCCATATTTGAAGGTTTTATTCTGCTA
TTGAGAGCCTTTTATTTGGGGATACTCTTTTCTCCTAGCATTGTGATGGCCCCATTTGCA
GATGTTTTTGGACCTTCTTTCAGGAAAATGTGGCTCCAGGTAGTTCGTAGCTCACTCGAA
AGAGCAGGTCCTGCATTTATCAAATGGGGCCAATGGGCAGCTACACGGCCTGATCTTTTC
TCTAGAGATTTGTGTACTGAGCTATCAAAGCTTCACACAAAAGCTCCTGAACATAGCTTT
GCTTACACGAAAAAGACAATCGAAAAAGCATTTGGTCGAAAACTTTCTGAAATTTTCGAT
GAATTCGAGGAGAAACCTCTGGCATCTGGAAGTATTGCTCAAGTGCATAGGGCATCCTTG
TTGTATCGATACCGTGGTCGACAGATCAAGCCTATAGTGGTGGCAGTGAAAGTTAGGCAT
CCTGGAGTGGGTGAATCAATTAGACGAGATTTTGAGATTATTAATCTAGTTGCTAAGATA
TCGAAGTGCATTCCTAAACTGAAGTGGTTAAGGTTAGATGAAAGCGTACAACAATTTGCT
GTTTTTATGATGTCTCAAGTAGATCTTGCTAGGGAAGCTGCACATTTAAGCCGCTTCACC
TATAATTTTCGGAGATGGAAGGATGTCTCTTTCCCAAAGCCTGTCTATCCCCTAGTGCAT
CCTGCAGTATTGGTCGAGACTTTTGAACAAGGGGAATGTGTTTCATATTATGTTGGTGAG
CTTGAGGGCCATGAAAGACTTAAGAGCGCACTTGCTCATATTGGGACCCATGCTCTTCTA
AAGATGCTTTTGGTGGATAACTTTATTCATGCTGACATGCATCCTGGAAATATCCTTGTT
CGGGTAACCCAAAGCAAGCAATCCCAGAAACGCATCTTCAAATCAAAGCCTCATGTTGTT
TTCCTTGATGTAGGCATGACTGCTGAACTTTCTAAGAATGATCGACCAGTATTATTGGAG
TTCTTTAAGGCAATTGCTCGTCGAGATGGCCAGACTGTAGCAGAGTGCACTCTGCAGTTG
TCAAAGAAACAGAGTTGCCCTAATCCAGAAGCCTTCGTTAAGGAAGTGAAGGAGTCATTT
GATTTTTGGGGGACTCCAGAAGGCGATTTGGTCCACCCTGCTGAGTGCATTGAACAACTT
CTTGAGAAAGTTAGGCATTACAGAGTGAACATAGATGGCAATGTTTGCACTGTCATGGTG
ACAACTTTGGTCCTTGAGGGCTGGCAAAGGAAGCTTGATCCTGATTATGATGTAATGCAC
ACCCTACAGACGCTGCTGCTCAAATCTGATTGGGCAGAATCACTATCTTACACCATTGAA
GGACTCATGGCCCCATGA

Peptide Sequence

PEP ID

XP_016489833.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase abkC [Nicotiana tabacum]
Sequence

MSRFLAVGKTKGLGQSLCRNQTTIRPEQARKGNLIRIGVSSPRCRFYGQYVSITRGHASS
MTYRMHSTFRGRCLMTSPRTSVSHHAQIAWKKLSCKSFYKGQTFICLSRFAQALCLALSR
SHVVLPGFLGLTYGRNIALARAPSDLESGRPRNSLYRHAEDGHVLITSLLHSIFEGFILL
LRAFYLGILFSPSIVMAPFADVFGPSFRKMWLQVVRSSLERAGPAFIKWGQWAATRPDLF
SRDLCTELSKLHTKAPEHSFAYTKKTIEKAFGRKLSEIFDEFEEKPLASGSIAQVHRASL
LYRYRGRQIKPIVVAVKVRHPGVGESIRRDFEIINLVAKISKCIPKLKWLRLDESVQQFA
VFMMSQVDLAREAAHLSRFTYNFRRWKDVSFPKPVYPLVHPAVLVETFEQGECVSYYVGE
LEGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVTQSKQSQKRIFKSKPHVV
FLDVGMTAELSKNDRPVLLEFFKAIARRDGQTVAECTLQLSKKQSCPNPEAFVKEVKESF
DFWGTPEGDLVHPAECIEQLLEKVRHYRVNIDGNVCTVMVTTLVLEGWQRKLDPDYDVMH
TLQTLLLKSDWAESLSYTIEGLMAP

Transcript Sequence

Gene sequence data has not been registered.